Advertisement
Review Article| Volume 39, ISSUE 1, P165-173, March 2023

Next-Generation Diagnostics for Pathogens

      Keywords

      To read this article in full you will need to make a payment

      Purchase one-time access:

      Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online access
      One-time access price info
      • For academic or personal research use, select 'Academic and Personal'
      • For corporate R&D use, select 'Corporate R&D Professionals'

      Subscribers receive full online access to your subscription and archive of back issues up to and including 2002.

      Content published before 2002 is available via pay-per-view purchase only.

      Subscribe:

      Subscribe to Veterinary Clinics: Food Animal Practice
      Already a print subscriber? Claim online access
      Already an online subscriber? Sign in
      Institutional Access: Sign in to ScienceDirect

      References

        • Datta S.
        • Budhauliya R.
        • Das B.
        • et al.
        Next-generation sequencing in clinical virology: Discovery of new viruses.
        World J Virol. 2015; 4: 265-276
        • Besser J.
        • Carleton H.A.
        • Gerner-Smidt P.
        • et al.
        Next-generation sequencing technologies and their application to the study and control of bacterial infections.
        Clin Microbiol Infect. 2018; 24: 335-341
        • Preston J.
        • VanZeeland A.
        • Peiffer D.A.
        Innovation at Illumina: the road to the $600 human genome. Nature Portfolio website.
        (Available at:) (Accessed 06/09/2022)
        • Slatko B.E.
        • Gardner A.F.
        • Ausubel F.M.
        Overview of next-generation sequencing technologies.
        Curr Protoc Mol Biol. 2018; 122: e59
      1. Whole Genome Sequencing (WGS) Program. U.S. Food & Drug Administration website.
        (Available at:) (Accessed 06, 09, 2022)
        • Morganti S.
        • Tarantino P.
        • Ferraro E.
        • et al.
        Next generation sequencing (NGS): a revolutionary technology in pharmacogenomics and personalized medicine in cancer.
        Adv Exp Med Biol. 2019; 1168: 9-30
        • Jacinto J.G.P.
        • Häfliger I.M.
        • Borel N.
        • et al.
        Clinicopathological and genomic characterization of a simmental calf with generalized bovine juvenile angiomatosis.
        Animals (Basel). 2021; 11: 624
        • Ariyarathne H.B.P.C.
        • Correa-Luna M.
        • Blair H.T.
        • et al.
        Identification of genomic regions associated with concentrations of milk fat, protein, urea and efficiency of crude protein utilization in grazing dairy cows.
        Genes (Basel). 2021; 12: 456-475
      2. National animal health laboratory network antimicrobial resistance pilot project. USDA APHIS VS website.
        (Available at:) (Accessed 06/07/2022)
      3. FDA-TRACK: Progress on FDA’s support of antimicrobial stewardship in veterinary settings. U.S. Food & Drug Administration website.
        (Available at:) (Accessed 06/07/2022)
        • Lefterova M.I.
        • Suarez C.J.
        • Niaz B.
        • et al.
        Next-generation sequencing for infectious disease diagnosis and management: a report of the association for molecular pathology.
        J Mol Diagn. 2015; 17: 623-634
        • Chiu C.Y.
        • Miller S.A.
        Clinical metagenomics.
        Nat Rev Genet. 2019; 20: 341-355
        • Anis E.
        • Hawkins I.K.
        • Ilha M.R.S.
        • et al.
        Evaluation of targeted next-generation sequencing for detection of bovine pathogens in clinical samples.
        J Clin Microbiol. 2018; 56 (e00399–18, https://doi.org/10.1128/JCM.00399-18)
        • Nagahashi M.
        • Shimada Y.
        • Ichikawa H.
        • et al.
        Next generation sequencing-based gene panel tests for the management of solid tumors.
        Cancer Sci. 2019; 110: 6
        • Singh R.R.
        Next-generation sequencing in high-sensitive detection of mutations in tumors: challenges, advances, and applications.
        J Mol Diagn. 2020; 22: 994-1007
        • Dulanto Chiang A.
        • Dekker J.P.
        From the pipeline to the bedside: advances and challenges in clinical metagenomics.
        J Infect Dis. 2020; 221: S331-S340
        • Goldberg B.
        • Sichtig H.
        • Geyer C.
        • et al.
        Making the leap from research laboratory to clinic: challenges and opportunities for next-generation sequencing in infectious disease diagnostics.
        mBio. 2015; 6 (e01888–15)
      4. Infectious disease next generation sequencing based diagnostic devices: microbial identification and detection of antimicrobial resistance and virulence markers. US Food & Drug Administration website.
        (Available at:) (Accessed 06/09/2022)
        • Anis E.
        • Ilha M.R.S.
        • Engiles J.B.
        • et al.
        Evaluation of targeted next-generation sequencing for detection of equine pathogens in clinical samples.
        J Vet Diagn Invest. 2021; 33: 227-234